---
name: mummer
version: 3.23
origin: biology/mummer
comment: A modular system for rapid whole genome alignment
arch: freebsd:9:x86:64
www: http://mummer.sourceforge.net/
maintainer: sylvio@FreeBSD.org
prefix: /usr/local
licenselogic: single
flatsize: 936764
desc: "MUMmer is a modular system for the rapid whole genome alignment of finished\nor
  draft sequence. This package provides an efficient suffix tree library,\nseed-and-extend
  alignment, SNP detection, repeat detection, and\nvisualization tools.\n\nWWW:\thttp://mummer.sourceforge.net/\n"
categories: [biology]
files:
  /usr/local/bin/annotate: c0ed8453993ed3736fbe19579502072cb24befdac5d278e1601165a76c0d2df3
  /usr/local/bin/combineMUMs: 9703fc17286fe18fb1cd2ad3c954fe63e29cae835648dd40fb610a8433f402bc
  /usr/local/bin/delta-filter: 976125766ccbcbbb7680fbf096faaaa119e4d2377f54d557468e94735bedd4fa
  /usr/local/bin/dnadiff: 8ef4c0fc7d801186037aa6e5776720ff1e6672dc1df91ec6a14d201807939287
  /usr/local/bin/exact-tandems: c6d69c16a6f0a65cd927769e1e4610de619c6f93b9729c42903b834032613c99
  /usr/local/bin/gaps: d4f994a73b07d76d2b6f31771392018afb85e544554fdd384b20dfc3ed482c76
  /usr/local/bin/mapview: 5c168b3afc89a4465ba08ba80284dc4bfcc5b9682bde676c7da352bf54e137b7
  /usr/local/bin/mgaps: 4b99fe5c33feaac20fab4119c8b148a1d11465c641a3cc7cc2493fea9bbd5833
  /usr/local/bin/mummer: e67896c8b6ef823643332d4716de45aa77af94843c1e50c0a372ceba53cb3dfb
  /usr/local/bin/mummerplot: cf43ac0ff1941b278eacabb4b7536c29a2a5dabd016484a36bde68b5fddb7cf9
  /usr/local/bin/nucmer: a663e30c9273525de88b9f69161d5f5471883c02252f5cdb8ee2a0dab985732e
  /usr/local/bin/nucmer2xfig: b8f119a8ec0c3710b478d301e86d2badcd0046160c50dde38c0e4746deef48ab
  /usr/local/bin/promer: 246c596397afc3b4747e1466297ec595d7ab67db9060b715283c7f2975e22020
  /usr/local/bin/repeat-match: a5853d1ade7a8a442cc742d97d79ba1a0e258ef9a653d330582c6d3291b33b14
  /usr/local/bin/run-mummer1: bb134db965f96a65eb769b9daf94030e2117a126232d56580ae01f0fd62cf077
  /usr/local/bin/run-mummer3: fc1afe98f6b5b409ee3aa1e1f0dbf0d311a4507381c99cc6def775d86ddb75d4
  /usr/local/bin/show-aligns: 77112cb3a127d61a90b20f3d271a5267b7e8828ea2728ab20207957b58d3b828
  /usr/local/bin/show-coords: f58e651006d66e9edec8ca517619530589a41296f051cbf7f74d526a5c7d6e5e
  /usr/local/bin/show-diff: d184266addbbe9dfcc39b2f813c8ee4195998da86b36f03db635321765c2e060
  /usr/local/bin/show-snps: e70e0a4becde39ce5f75e9b37db2d653603e2b914da589f098721e9426bd7983
  /usr/local/bin/show-tiling: 4e01dd239cdf73a594243b85c86cd2dd5f0ca43a2ae790ab374943e275640c0f
  /usr/local/share/doc/mummer/COPYRIGHT: 9469bbabef5583edf9995e2bc5b0f62d8c611ccb22374e2a0f6f2567f1b6a146
  /usr/local/share/doc/mummer/INSTALL: 3a1caf741d966138b353632f129417a3bd7b29cbc6111796106f703fc988aaaf
  /usr/local/share/doc/mummer/LICENSE: 9f82254f6399db70f5ad32fd9ae792d93f97c174e728912dcf9a13a16219ddaa
  /usr/local/share/doc/mummer/README: 9bd843bb5798dd811a803ac5ab8ca179c4bafdcf8f6d2d693b5f635b9f2c9af9
directories:
  /usr/local/share/doc/mummer/: n
scripts: {}
